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GrainGenes Marker Report: k08955

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Locus	k08955
Type	CAPS
Chromosome	3H
Map	Hv-HNxH602-3H 291.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH62H20
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = TaqI SNP = T/C SNP structure (UNICODE) = CTCAAAAGTTYGAAGGATTGA Parent 1 SNP sequence = CTCAAAAGTTTGAAGGATTGA Parent 2 SNP sequence = CTCAAAAGTTCGAAGGATTGA Recognized sequence for CAPs locus = TCGA
Probe for Locus	BaH62H20
Locus	k08955
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TCAGCGATGAATATTTCCCC Right 5' - CTGTTTCGGTCGCTACAAGA
Sequence	BJ474430
PCR size	373