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GrainGenes Marker Report: k08988

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Locus	k08988
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 194
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH50I23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 15 ] SNP = C/T SNP structure (UNICODE) = ATTCCAAGTTYGCACCACACA Parent 1 SNP sequence = ATTCCAAGTTCGCACCACACA Parent 2 SNP sequence = ATTCCAAGTTTGCACCACACA SNP = A/T SNP structure (UNICODE) = AGGTAGCAGAWAAGAGGTGAT Parent 1 SNP sequence = AGGTAGCAGAAAAGAGGTGAT Parent 2 SNP sequence = AGGTAGCAGATAAGAGGTGAT SNP = T/C SNP structure (UNICODE) = GCTTGCATGCYAATGCCATCG Parent 1 SNP sequence = GCTTGCATGCTAATGCCATCG Parent 2 SNP sequence = GCTTGCATGCCAATGCCATCG SNP structure (UNICODE) = TTTGGAGAACYATGAGATTAA Parent 1 SNP sequence = TTTGGAGAACCATGAGATTAA Parent 2 SNP sequence = TTTGGAGAACTATGAGATTAA
Probe for Locus	BaH50I23
Locus	k08988
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0043L09.15 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TCTGACTGAAGAAATGCCACA Right 5' - CGACGATGCCATGAGCTAC
Sequence	BU997420
PCR size	396