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GrainGenes Marker Report: k09008

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Locus	k09008
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 74.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH56A24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/T SNP structure (UNICODE) = ACTTGGGCGCYGCCTCCAGCT Parent 1 SNP sequence = ACTTGGGCGCCGCCTCCAGCT Parent 2 SNP sequence = ACTTGGGCGCTGCCTCCAGCT SNP = T/C SNP structure (UNICODE) = GCTCCTTCTTYTCCACGCTCT Parent 1 SNP sequence = GCTCCTTCTTTTCCACGCTCT Parent 2 SNP sequence = GCTCCTTCTTCTCCACGCTCT
Probe for Locus	BaH56A24
Locus	k09008
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Elongation factor 1-alpha (EF-1-alpha)
Type	PCR
PCR primers	Left 5' - AACTCATGACTCGGTCCAGG Right 5' - GTTCGTCAAGGAGACGGAGA
PCR size	390