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GrainGenes Marker Report: k09021

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Locus	k09021
Type	CAPS
Chromosome	7H
Map	Hv-HNxH602-7H 266.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH54J20
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = NcoI SNP = G/T SNP structure (UNICODE) = ATTTCAGCCAKGGTCATCATC Parent 1 SNP sequence = ATTTCAGCCAGGGTCATCATC Parent 2 SNP sequence = ATTTCAGCCATGGTCATCATC Recognized sequence for CAPs locus = CCATGG
Probe for Locus	BaH54J20
Locus	k09021
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GCGAAAACCCGAAATACAAC Right 5' - GGTAAAGCAGCAAGTGAGCC
Sequence	BJ485220
PCR size	391