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GrainGenes Marker Report: k09072

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Locus	k09072
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 133.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH45P22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/T SNP structure (UNICODE) = TCTGTGCTCAYATGGAATGGG Parent 1 SNP sequence = TCTGTGCTCACATGGAATGGG Parent 2 SNP sequence = TCTGTGCTCATATGGAATGGG SNP = T/C SNP structure (UNICODE) = AATATGAAAAYGAGAAGTAAC Parent 1 SNP sequence = AATATGAAAATGAGAAGTAAC Parent 2 SNP sequence = AATATGAAAACGAGAAGTAAC
Probe for Locus	BaH45P22
Locus	k09072
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = serine/threonine protein kinase [Axonopus compressus]
Type	PCR
PCR primers	Left 5' - TGCCATCTCAAAAGAGCACA Right 5' - GCGTTCTCTTGCATAATGGAG
PCR size	397