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GrainGenes Marker Report: k09165

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Locus	k09165
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 70.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH50O07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 14 ] SNP = T/A SNP structure (UNICODE) = TTCTTAAGTTWATATACATCT Parent 1 SNP sequence = TTCTTAAGTTTATATACATCT Parent 2 SNP sequence = TTCTTAAGTTAATATACATCT SNP = T/C SNP structure (UNICODE) = AAGAGGTGTCYGTTGGCAATG Parent 1 SNP sequence = AAGAGGTGTCTGTTGGCAATG Parent 2 SNP sequence = AAGAGGTGTCCGTTGGCAATG SNP structure (UNICODE) = CGAGATTGAAYGAAAGTAATG Parent 1 SNP sequence = CGAGATTGAATGAAAGTAATG Parent 2 SNP sequence = CGAGATTGAACGAAAGTAATG SNP structure (UNICODE) = GATCAGTCTTYATTTCTATTG Parent 1 SNP sequence = GATCAGTCTTTATTTCTATTG Parent 2 SNP sequence = GATCAGTCTTCATTTCTATTG
Probe for Locus	BaH50O07
Locus	k09165
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GTATGCAGGAAAGCAACGGT Right 5' - GGAGCGGACGACTCTTACAG
PCR size	225