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GrainGenes Marker Report: k09212

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Locus	k09212
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 280.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH16P20
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/C SNP structure (UNICODE) = CGACGGTGCCSACCACCGTCA Parent 1 SNP sequence = CGACGGTGCCGACCACCGTCA Parent 2 SNP sequence = CGACGGTGCCCACCACCGTCA SNP = A/C SNP structure (UNICODE) = CCTCCTTGGCMGGGCCGACGG Parent 1 SNP sequence = CCTCCTTGGCAGGGCCGACGG Parent 2 SNP sequence = CCTCCTTGGCCGGGCCGACGG
Probe for Locus	BaH16P20
Locus	k09212
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0043A12.4 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AAATCGCAACAAAATCAGCC Right 5' - GGTGAGCCTGAGCAGGTAGA
Sequence	AV943343
PCR size	411