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GrainGenes Marker Report: k09325

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Locus	k09325
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 193.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH32J04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 24 ] SNP = T/C SNP structure (UNICODE) = GCTCTCCATGYTGAGAACTCT Parent 1 SNP sequence = GCTCTCCATGTTGAGAACTCT Parent 2 SNP sequence = GCTCTCCATGCTGAGAACTCT SNP = T/G SNP structure (UNICODE) = AGAGAGAGCCKCTTCGATTAC Parent 1 SNP sequence = AGAGAGAGCCTCTTCGATTAC Parent 2 SNP sequence = AGAGAGAGCCGCTTCGATTAC SNP = C/G SNP structure (UNICODE) = ACATGTACAASAGATTTACAT Parent 1 SNP sequence = ACATGTACAACAGATTTACAT Parent 2 SNP sequence = ACATGTACAAGAGATTTACAT SNP = A/C SNP structure (UNICODE) = TGAAGGAGGCMCAAAATGTAC Parent 1 SNP sequence = TGAAGGAGGCACAAAATGTAC Parent 2 SNP sequence = TGAAGGAGGCCCAAAATGTAC SNP = G/A SNP structure (UNICODE) = TATGGACATGRCTACAGAATT Parent 1 SNP sequence = TATGGACATGGCTACAGAATT Parent 2 SNP sequence = TATGGACATGACTACAGAATT SNP = C/A SNP structure (UNICODE) = TTATCTCTCTMTGCTCTATTG Parent 1 SNP sequence = TTATCTCTCTCTGCTCTATTG Parent 2 SNP sequence = TTATCTCTCTATGCTCTATTG
Probe for Locus	BaH32J04
Locus	k09325
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Hypothetical protein [Oryza sativa]
Type	PCR
PCR primers	Left 5' - GCTTAGTTGGCTGCCTGTTC Right 5' - AGCAACGCCAAGGTACAGTT
Sequence	AV834002
PCR size	421