Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k09400

[Submit comment/correction]

Locus	k09400
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 250.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH50L23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = T/G SNP structure (UNICODE) = CTGGCCTCTTKGCTGGCCTGT Parent 1 SNP sequence = CTGGCCTCTTTGCTGGCCTGT Parent 2 SNP sequence = CTGGCCTCTTGGCTGGCCTGT SNP = T/A SNP structure (UNICODE) = TTGCATACGAWACTGAAACAT Parent 1 SNP sequence = TTGCATACGATACTGAAACAT Parent 2 SNP sequence = TTGCATACGAAACTGAAACAT SNP = G/T SNP structure (UNICODE) = TTTCGACTTTKGCTGACTCTG Parent 1 SNP sequence = TTTCGACTTTGGCTGACTCTG Parent 2 SNP sequence = TTTCGACTTTTGCTGACTCTG
Probe for Locus	BaH50L23
Locus	k09400
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - AATGGTGAAAGGGTCGACTG Right 5' - TCATCCTGCTTTTGACATGC
PCR size	364