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GrainGenes Marker Report: k09489

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Locus	k09489
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 101.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD14C15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/G SNP structure (UNICODE) = CACTTACAAARGACTTCATCA Parent 1 SNP sequence = CACTTACAAAAGACTTCATCA Parent 2 SNP sequence = CACTTACAAAGGACTTCATCA SNP = C/T SNP structure (UNICODE) = TGTTAACACTYACGACCAGGA Parent 1 SNP sequence = TGTTAACACTCACGACCAGGA Parent 2 SNP sequence = TGTTAACACTTACGACCAGGA
Probe for Locus	BaSD14C15
Locus	k09489
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = SGT1 [Hordeum vulgare]
Type	PCR
PCR primers	Left 5' - CACAGATTAACCAGCAGCCA Right 5' - AGCACTGTGAGTGTGATGGG
Sequence	AV929423
PCR size	409