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GrainGenes Marker Report: k09491

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Locus
k09491
Type
SNP
Chromosome
3H
Map
Hv-HNxH602-3H268.1
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
BaSD16I09
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 12 ]
SNP = A/G
SNP structure (UNICODE) = TATGATATACRTGTGCGAGAG
Parent 1 SNP sequence = TATGATATACATGTGCGAGAG
Parent 2 SNP sequence = TATGATATACGTGTGCGAGAG
SNP = G/A
SNP structure (UNICODE) = CTGGCTCCTCRGTGATGGTAA
Parent 1 SNP sequence = CTGGCTCCTCGGTGATGGTAA
Parent 2 SNP sequence = CTGGCTCCTCAGTGATGGTAA
SNP = G/C
SNP structure (UNICODE) = TACATCCACCSCAGGACCAAA
Parent 1 SNP sequence = TACATCCACCGCAGGACCAAA
Parent 2 SNP sequence = TACATCCACCCCAGGACCAAA



Probe for Locus
BaSD16I09
Locus
k09491
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type
PCR
PCR primers
Left 5' - CAGTGGAAATGGTAGGCCAG
Right 5' - CACTTCACAGGACGAGACGA
PCR size
420