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GrainGenes Marker Report: k09552

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Locus	k09552
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 90.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD18C12
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/C SNP structure (UNICODE) = ACATCTGGGGSAGCCAAACAG Parent 1 SNP sequence = ACATCTGGGGGAGCCAAACAG Parent 2 SNP sequence = ACATCTGGGGCAGCCAAACAG SNP = A/G SNP structure (UNICODE) = TCGGCGTTTCRTTCGCGCTAG Parent 1 SNP sequence = TCGGCGTTTCATTCGCGCTAG Parent 2 SNP sequence = TCGGCGTTTCGTTCGCGCTAG
Probe for Locus	BaSD18C12
Locus	k09552
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = galactosyltransferase family protein [Arabidopsis thaliana] pir H86453 avr9 homolog F9L11.10 [imported] - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - CAGGCCGGAGATATGAATGT Right 5' - GCATCATGGTGTATCAACGC
Sequence	AV837052
PCR size	435