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GrainGenes Marker Report: k09604

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Locus	k09604
Type	CAPS
Chromosome	3H
Map	Hv-HNxH602-3H 97
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD14G02
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = SspI SNP = A/C SNP structure (UNICODE) = ACATGCGAATMTTTTTTTAAT Parent 1 SNP sequence = ACATGCGAATATTTTTTTAAT Parent 2 SNP sequence = ACATGCGAATCTTTTTTTAAT Recognized sequence for CAPs locus = AATATT
Probe for Locus	BaSD14G02
Locus	k09604
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TACATACGGGACCGGGATAA Right 5' - GAGGAACAGTGGGGTACGAA
Sequence	AV929483
PCR size	371