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GrainGenes Marker Report: k09605

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Locus	k09605
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 119.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD14M22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/T SNP structure (UNICODE) = GCAGTTATAAWTTGCTACTGT Parent 1 SNP sequence = GCAGTTATAAATTGCTACTGT Parent 2 SNP sequence = GCAGTTATAATTTGCTACTGT SNP = A/C SNP structure (UNICODE) = AGCACTTCATMAGTGCTTCCA Parent 1 SNP sequence = AGCACTTCATAAGTGCTTCCA Parent 2 SNP sequence = AGCACTTCATCAGTGCTTCCA
Probe for Locus	BaSD14M22
Locus	k09605
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative signal peptidase subunit [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TTTCCGGGATAAGAGTGTGC Right 5' - CGACTCGGTTGTTTGCTACA
Sequence	BU998847
PCR size	373