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GrainGenes Marker Report: k09629

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Locus	k09629
Type	CAPS
Chromosome	5H
Map	Hv-HNxH602-5H 206.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD18I03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = DraI SNP = T/A SNP structure (UNICODE) = GACAGATTTAWAAGAAGTTTT Parent 1 SNP sequence = GACAGATTTATAAGAAGTTTT Parent 2 SNP sequence = GACAGATTTAAAAGAAGTTTT Recognized sequence for CAPs locus = TTTAAA
Probe for Locus	BaSD18I03
Locus	k09629
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CTTGCACTTTATGCCTTGCC Right 5' - TGTCTTACTTGCCACCCCTC
Sequence	AV837056
PCR size	373