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GrainGenes Marker Report: k09635

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Locus	k09635
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 118.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD26M15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = GGCATGCCACRATCCACATAT Parent 1 SNP sequence = GGCATGCCACGATCCACATAT Parent 2 SNP sequence = GGCATGCCACAATCCACATAT SNP = A/C SNP structure (UNICODE) = CTTAATAATAMGGCATGCATC Parent 1 SNP sequence = CTTAATAATAAGGCATGCATC Parent 2 SNP sequence = CTTAATAATACGGCATGCATC
Probe for Locus	BaSD26M15
Locus	k09635
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = hypersensitive-induced reaction protein 3 [Hordeum vulgare subsp. vulgare]
Type	PCR
PCR primers	Left 5' - GGTAACCAACTACGACCGGA Right 5' - AAGAAGCCTCACCGCTACAG
Sequence	CD054181
PCR size	382