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GrainGenes Marker Report: k09766

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Locus	k09766
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 25.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD3C22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = AGCGTCCCTTRCCGGGATGGC Parent 1 SNP sequence = AGCGTCCCTTGCCGGGATGGC Parent 2 SNP sequence = AGCGTCCCTTACCGGGATGGC SNP = C/T SNP structure (UNICODE) = TGACGCAGTAYCTTGATGCAA Parent 1 SNP sequence = TGACGCAGTACCTTGATGCAA Parent 2 SNP sequence = TGACGCAGTATCTTGATGCAA
Probe for Locus	BaSD3C22
Locus	k09766
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative o-methyltransferase ZRP4 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ATAGTAGCACAACACCGCCC Right 5' - GTGTGGTGGCTACATTGGTG
Sequence	AV836790
PCR size	298