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GrainGenes Marker Report: k09845

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Locus	k09845
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 138.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD2E24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/C SNP structure (UNICODE) = TCTCTCTTTTYCAGCATGAAG Parent 1 SNP sequence = TCTCTCTTTTTCAGCATGAAG Parent 2 SNP sequence = TCTCTCTTTTCCAGCATGAAG SNP = A/G SNP structure (UNICODE) = CGTAATCTTARGATTCATATA Parent 1 SNP sequence = CGTAATCTTAAGATTCATATA Parent 2 SNP sequence = CGTAATCTTAGGATTCATATA
Probe for Locus	BaSD2E24
Locus	k09845
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Ras-related protein Rab-2-B pir T02248 GTP-binding protein rab2b - maize
Type	PCR
PCR primers	Left 5' - GGAGTTTCGCATGAGGACAT Right 5' - AAAGCAAATGGAACTGACGG
Sequence	AV927490
PCR size	352