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GrainGenes Marker Report: k09899

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Locus	k09899
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 77.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaSD21D14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 16 ] SNP = G/C SNP structure (UNICODE) = GACTCCATTCSGTTCCAGCAA Parent 1 SNP sequence = GACTCCATTCGGTTCCAGCAA Parent 2 SNP sequence = GACTCCATTCCGTTCCAGCAA SNP = T/C SNP structure (UNICODE) = ACATTGCTTCYCCCACATGGT Parent 1 SNP sequence = ACATTGCTTCTCCCACATGGT Parent 2 SNP sequence = ACATTGCTTCCCCCACATGGT SNP = C/T SNP structure (UNICODE) = ACAAAGAAGGYCGTTCATGAT Parent 1 SNP sequence = ACAAAGAAGGCCGTTCATGAT Parent 2 SNP sequence = ACAAAGAAGGTCGTTCATGAT SNP = G/A SNP structure (UNICODE) = TGATGATCCARCAAACAAGGG Parent 1 SNP sequence = TGATGATCCAGCAAACAAGGG Parent 2 SNP sequence = TGATGATCCAACAAACAAGGG
Probe for Locus	BaSD21D14
Locus	k09899
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GGCTCAGGCTCTAACATTGG Right 5' - ATGTTTGGCAAGGAGTACCG
Sequence	AV930164
PCR size	362