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GrainGenes Marker Report: k09963

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Locus	k09963
Type	CAPS
Chromosome	6H
Map	Hv-HNxH602-6H 118.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast50G0814
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = ScaI SNP = G/C SNP structure (UNICODE) = CTACAGCACASTACTCTGCCG Parent 1 SNP sequence = CTACAGCACAGTACTCTGCCG Parent 2 SNP sequence = CTACAGCACACTACTCTGCCG Recognized sequence for CAPs locus = AGTACT
Probe for Locus	bast50G0814
Locus	k09963
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - AGGCTGCGTCAACCAATAAC Right 5' - AACCATCATGTTCCCAGAGG
PCR size	308