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GrainGenes Marker Report: k10171

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Locus	k10171
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 108.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast58F0412
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 18 ] SNP = G/A SNP structure (UNICODE) = CGGGGCCGCARATATACATTG Parent 1 SNP sequence = CGGGGCCGCAGATATACATTG Parent 2 SNP sequence = CGGGGCCGCAAATATACATTG SNP = T/G SNP structure (UNICODE) = AATGAACCCAKAAAGGAGATT Parent 1 SNP sequence = AATGAACCCATAAAGGAGATT Parent 2 SNP sequence = AATGAACCCAGAAAGGAGATT SNP = A/G SNP structure (UNICODE) = ACAGGGAACGRCTATAAAAGC Parent 1 SNP sequence = ACAGGGAACGACTATAAAAGC Parent 2 SNP sequence = ACAGGGAACGGCTATAAAAGC SNP structure (UNICODE) = CCTAACAGTAKAAATGCTATG Parent 1 SNP sequence = CCTAACAGTATAAATGCTATG Parent 2 SNP sequence = CCTAACAGTAGAAATGCTATG SNP structure (UNICODE) = TACTACTAACRCGTTACTGGG Parent 1 SNP sequence = TACTACTAACGCGTTACTGGG Parent 2 SNP sequence = TACTACTAACACGTTACTGGG
Probe for Locus	bast58F0412
Locus	k10171
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GTTGGTTTTCAAGTCCCCAA Right 5' - CTTGCTGTTCTGGCTGATGA
PCR size	250