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GrainGenes Marker Report: k10223

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Locus	k10223
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 160.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast62B0404
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = G/T SNP structure (UNICODE) = GGCGGGTACAKACAAGCAACC Parent 1 SNP sequence = GGCGGGTACAGACAAGCAACC Parent 2 SNP sequence = GGCGGGTACATACAAGCAACC SNP = T/C SNP structure (UNICODE) = ATCTCCATCTYATTATTCTGC Parent 1 SNP sequence = ATCTCCATCTTATTATTCTGC Parent 2 SNP sequence = ATCTCCATCTCATTATTCTGC SNP structure (UNICODE) = AAGTTTCAAGYAGCTGCCGCT Parent 1 SNP sequence = AAGTTTCAAGTAGCTGCCGCT Parent 2 SNP sequence = AAGTTTCAAGCAGCTGCCGCT
Probe for Locus	bast62B0404
Locus	k10223
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = dehydrin 3 [Hordeum vulgare]
Type	PCR
PCR primers	Left 5' - CACACCAAAAAGCAAGCTGA Right 5' - CAATTGAATGGGAGACGCTT
Sequence	AF043089
PCR size	253