GrainGenes Marker Report: k10320
Locus
k10320
Type
CAPS
Chromosome
7H
Map
Hv-HNxH602-7H 86
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
bast42C0406
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = XspI SNP = C/A SNP structure (UNICODE) = AGTGCCTCCTMGCCAGCGACA Parent 1 SNP sequence = AGTGCCTCCTCGCCAGCGACA Parent 2 SNP sequence = AGTGCCTCCTAGCCAGCGACA Recognized sequence for CAPs locus = CTAG
Probe for Locus
bast42C0406
Locus
k10320
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = EST AU077941(C12908) corresponds to a region of the predicted gene.~Similar to OsENOD93a gene for early nodulin
Type
PCR
PCR primers
Left 5' - TGTTGTGCGTGTCTTGTGAA
Right 5' - AGCATATCCTGTGGCACCTC
Sequence
BQ662756
PCR size
297
GrainGenes Marker Report: k10320
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