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GrainGenes Marker Report: k10471

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Locus	k10471
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 255.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast74C0206
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = A/G SNP structure (UNICODE) = TGAACAGCCCRAAGTTCTTCT Parent 1 SNP sequence = TGAACAGCCCAAAGTTCTTCT Parent 2 SNP sequence = TGAACAGCCCGAAGTTCTTCT SNP structure (UNICODE) = TTATTCGACCRCGAAATATCC Parent 1 SNP sequence = TTATTCGACCACGAAATATCC Parent 2 SNP sequence = TTATTCGACCGCGAAATATCC SNP = G/C SNP structure (UNICODE) = GCGTGCCATTSCCGACGTGGT Parent 1 SNP sequence = GCGTGCCATTGCCGACGTGGT Parent 2 SNP sequence = GCGTGCCATTCCCGACGTGGT
Probe for Locus	bast74C0206
Locus	k10471
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = GLUCAN ENDO-1,3-BETA-GLUCOSIDASE GIII PRECURSOR ((1->3)-BETA-GLUCAN ENDOHYDROLASE GIII) ((1->3)-BETA-GLUCANASE ISOENZYME
Type	PCR
PCR primers	Left 5' - GCACACATTGGCAGAGAAAA Right 5' - TGCATGCAACAGTGATCAAA
Sequence	BJ460231
PCR size	260