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GrainGenes Marker Report: k10531

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Locus	k10531
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 36.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bastl50E0309
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = GCTCCGGGTCRTGGTTCATGC Parent 1 SNP sequence = GCTCCGGGTCGTGGTTCATGC Parent 2 SNP sequence = GCTCCGGGTCATGGTTCATGC SNP = A/G SNP structure (UNICODE) = CGTGGCGAACRCCCTTTATTC Parent 1 SNP sequence = CGTGGCGAACACCCTTTATTC Parent 2 SNP sequence = CGTGGCGAACGCCCTTTATTC
Probe for Locus	bastl50E0309
Locus	k10531
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = lipoxygenase 1 protein [Hordeum vulgare]
Type	PCR
PCR primers	Left 5' - GGCTTCTGACAGTCACCTCC Right 5' - GACCGTGGCAGGTATAAGGA
Sequence	CA015674
PCR size	281