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GrainGenes Marker Report: k10726

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Locus	k10726
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 281.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bastl20B0404
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = A/G SNP structure (UNICODE) = AAAAAAAAAARAAAAAAAAAA Parent 1 SNP sequence = AAAAAAAAAAAAAAAAAAAAA Parent 2 SNP sequence = AAAAAAAAAAGAAAAAAAAAA SNP = C/T SNP structure (UNICODE) = AAGAGCTGACYGTGGAAACCA Parent 1 SNP sequence = AAGAGCTGACCGTGGAAACCA Parent 2 SNP sequence = AAGAGCTGACTGTGGAAACCA SNP = G/A Parent 1 SNP sequence = AAAAAAAAAAGAAAAAAAAAA Parent 2 SNP sequence = AAAAAAAAAAAAAAAAAAAAA
Probe for Locus	bastl20B0404
Locus	k10726
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = B1144G04.12 [Oryza sativa (japonica cultivar-group)] dbj BAB90021.1 B1144G04.12 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AAACCAACCAAAAGCCACAG Right 5' - GAGGTGCCAGAGGAACAAAC
PCR size	260