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GrainGenes Marker Report: k10813

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Locus	k10813
Type	CAPS
Chromosome	1H
Map	Hv-HNxH602-1H 299.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bastl45E1109
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = MboI SNP = T/C SNP structure (UNICODE) = ATCCGAGGATYCAGCAGGCTG Parent 1 SNP sequence = ATCCGAGGATTCAGCAGGCTG Parent 2 SNP sequence = ATCCGAGGATCCAGCAGGCTG Recognized sequence for CAPs locus = GATC
Probe for Locus	bastl45E1109
Locus	k10813
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - AGCTTGTCCAATGTCGAACC Right 5' - CTCAGGCAATGCATCAAATG
PCR size	330