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GrainGenes Marker Report: k10948

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Locus	k10948
Type	CAPS
Chromosome	3H
Map	Hv-HNxH602-3H 277
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	kr23D0408
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = HinfI SNP = C/G SNP structure (UNICODE) = TGWACAGACTSAGCTGAGAGA Parent 1 SNP sequence = TGTACAGACTCAGCTGAGAGA Parent 2 SNP sequence = TGAACAGACTGAGCTGAGAGA Recognized sequence for CAPs locus = GANTC
Probe for Locus	kr23D0408
Locus	k10948
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - AGCGGTGGACACTAGCATTT Right 5' - CTCCACTTCCATTCTCCAGC
PCR size	275