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GrainGenes Marker Report: k11135

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Locus	k11135
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 255.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	kr25B1103
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = G/A SNP structure (UNICODE) = ACTGCCCACCRGTCGTCCCCA Parent 1 SNP sequence = ACTGCCCACCGGTCGTCCCCA Parent 2 SNP sequence = ACTGCCCACCAGTCGTCCCCA SNP = C/T SNP structure (UNICODE) = AGGGCTGCGGYCCCTACTGCC Parent 1 SNP sequence = AGGGCTGCGGCCCCTACTGCC Parent 2 SNP sequence = AGGGCTGCGGTCCCTACTGCC SNP structure (UNICODE) = GATCAACACGYTGAAGCTGGG Parent 1 SNP sequence = GATCAACACGCTGAAGCTGGG Parent 2 SNP sequence = GATCAACACGTTGAAGCTGGG
Probe for Locus	kr25B1103
Locus	k11135
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = lipid transfer protein-like protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GCACGGTGATCCTTACAGGT Right 5' - GATGAGGACATGGAGGAGGA
Sequence	CA018876
PCR size	264