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GrainGenes Marker Report: k11203

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Locus	k11203
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 123.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	kr33A0901
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/T SNP structure (UNICODE) = CGCTGCCCAAKGTCGAGCTAC Parent 1 SNP sequence = CGCTGCCCAAGGTCGAGCTAC Parent 2 SNP sequence = CGCTGCCCAATGTCGAGCTAC SNP = C/A SNP structure (UNICODE) = ATGGCTTCAAMAAACGCCGCA Parent 1 SNP sequence = ATGGCTTCAACAAACGCCGCA Parent 2 SNP sequence = ATGGCTTCAAAAAACGCCGCA
Probe for Locus	kr33A0901
Locus	k11203
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = proline-rich protein family-like protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CGCACTCGTCCAAGTTTACA Right 5' - TGCTCTTCATGTTCGTCGTC
Sequence	CA019850
PCR size	227