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GrainGenes Marker Report: k11251

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Locus	k11251
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 195.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	kr18C0505
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 23 ] SNP = G/C SNP structure (UNICODE) = ATTTGGCAGASACGAAATGCG Parent 1 SNP sequence = ATTTGGCAGAGACGAAATGCG Parent 2 SNP sequence = ATTTGGCAGACACGAAATGCG SNP = G/T SNP structure (UNICODE) = TGGACCATACKTGATATCCAT Parent 1 SNP sequence = TGGACCATACGTGATATCCAT Parent 2 SNP sequence = TGGACCATACTTGATATCCAT SNP structure (UNICODE) = GCTTTTGGGGSGGTCATCTAG Parent 1 SNP sequence = GCTTTTGGGGGGGTCATCTAG Parent 2 SNP sequence = GCTTTTGGGGCGGTCATCTAG SNP = T/G SNP structure (UNICODE) = ACAAAAATCAKCAGATAATGT Parent 1 SNP sequence = ACAAAAATCATCAGATAATGT Parent 2 SNP sequence = ACAAAAATCAGCAGATAATGT SNP = G/A SNP structure (UNICODE) = AAACACTATCRTTACGCCTAT Parent 1 SNP sequence = AAACACTATCGTTACGCCTAT Parent 2 SNP sequence = AAACACTATCATTACGCCTAT SNP = T/A SNP structure (UNICODE) = TGATGATTGAWCAGGGCCTGA Parent 1 SNP sequence = TGATGATTGATCAGGGCCTGA Parent 2 SNP sequence = TGATGATTGAACAGGGCCTGA
Probe for Locus	kr18C0505
Locus	k11251
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Hypothetical protein [Oryza sativa]
Type	PCR
PCR primers	Left 5' - CCACGATCTCCTCCCTGATA Right 5' - TCATCGCCATAAGAGGGAAC
Sequence	AL499795
PCR size	232