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GrainGenes Marker Report: k11348

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Locus	k11348
Type	CAPS
Chromosome	4H
Map	Hv-HNxH602-4H 116.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	kr65H0816
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = Cfr13I SNP = C/T SNP structure (UNICODE) = CCATGATGGAYCTATATACAA Parent 1 SNP sequence = CCATGATGGACCTATATACAA Parent 2 SNP sequence = CCATGATGGATCTATATACAA Recognized sequence for CAPs locus = GGNCC
Probe for Locus	kr65H0816
Locus	k11348
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GTTGCACAAACATGGCCTAA Right 5' - AAATGGGCAAAAGGTCCAT
Sequence	BU978220
PCR size	151