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GrainGenes Marker Report: scsnp00460

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Locus	scsnp00460
Type	SNP
Synonym	Other name SNP1239(2) Synonym ABC00460_L01R01
Chromosome	7H
Map	[ Hide all but 1 of 7 ] Hordeum-Consensus2005-SNP-7H 74.96 Hordeum-OWB-2005-7H 66.3 Hordeum-OWB-OPA2008-7H 60.879 Hordeum-OWB-SNP-7H 53.65 Hordeum-QTLConsensus-Abiotic-7H 74.96 Hordeum-QTLConsensus-Agronomic-7H 74.96 Hv-Integrated2009-7H 62.7
	[ Show Nearby Loci ]
Map Data	Barley, Abiotic QTL Consensus [ Show all 7 ]
Species	Hordeum vulgare
Probe	ABC00460_L01R01
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Russell, Joanne
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Probe for Locus	ABC00460_L01R01
Locus	scsnp00460
Data at Germinate	ABC00460
Data at PLEXdb	Barley1_00460
General Remarks	Estimated product size = 98 BarleySNP type = SNP From EST Technology platform used = PyrosequencingTM Technology Affymetrix contig name = abc00460
Type	STS
PCR primers	5' TTGAAGACATCCTCCGTGCT 5' CCCGAATGTAGTCCCAGACA
Sequence	Barley1_00460
Source Species	Hordeum vulgare