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GrainGenes Marker Report: scssr16991

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Locus	scssr16991
Type	Microsatellite
Chromosome	5H
Map	Barley-ConsensusFHB-5H 88.67 [ Show all 7 ]
	[ Show Nearby Loci ]
Map Data	[ Hide all but 1 of 7 ] Barley, Abiotic QTL Consensus Barley, Agronomic QTL Consensus Barley, Consensus 2005, SNP Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009 Barley, OWB, SNP
Species	Hordeum vulgare
Probe	ABC16991_L01R01 scssr16991
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Ramsay L et al. (2004) Variation shown by molecular markers in barley: genomic and genetic contraints Aspects of Applied Biology 72:146-154.
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' [ Show all 6 ]
Probe for Locus	ABC16991_L01R01
Locus	scind16991 scssr16991
Data at Germinate	ABC16991
General Remarks	Estimated product size = 181 BarleySNP type = EST Indel Technology platform used = Radioisotope Labelled PCR Separation Affymetrix contig name = abc16991
Type	STS
PCR primers	5' CGCCGTTCCAGTTTAACTTC 5' GGGCTTCCCCTCCTTTGTAT
Source Species	Hordeum vulgare