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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0007630

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0007630
Locus	HORVU.MOREX.r2.1HG0007630.1
URL	Gene Ontology GO:0001726 [ Show all 18 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 20 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: cytochrome P450, family 705, subfamily A, polypeptide 1 GO:0001726; cellular_component; ruffle GO:0001933; biological_process; negative regulation of protein phosphorylation GO:0003674; molecular_function; molecular_function GO:0005886; cellular_component; plasma membrane GO:0005911; cellular_component; cell-cell junction GO:0010629; biological_process; negative regulation of gene expression GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0030335; biological_process; positive regulation of cell migration GO:0030837; biological_process; negative regulation of actin filament polymerization GO:0030864; cellular_component; cortical actin cytoskeleton GO:0031579; biological_process; membrane raft organization GO:0034115; biological_process; negative regulation of heterotypic cell-cell adhesion GO:0045121; cellular_component; membrane raft GO:0061028; biological_process; establishment of endothelial barrier GO:0072659; biological_process; protein localization to plasma membrane GO:0090038; biological_process; negative regulation of protein kinase C signaling GO:1900026; biological_process; positive regulation of substrate adhesion-dependent cell spreading
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0007630.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)