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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0008100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0008100
Locus	HORVU.MOREX.r2.1HG0008100.1
URL	Gene Ontology GO:0000245 [ Show all 21 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 23 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Protein aluminum sensitive 3 GO:0000245; biological_process; spliceosomal complex assembly GO:0000398; biological_process; mRNA splicing, via spliceosome GO:0000974; cellular_component; Prp19 complex GO:0003674; molecular_function; molecular_function GO:0003723; molecular_function; RNA binding GO:0005575; cellular_component; cellular_component GO:0005634; cellular_component; nucleus GO:0005681; cellular_component; spliceosomal complex GO:0006396; biological_process; RNA processing GO:0006397; biological_process; mRNA processing GO:0008380; biological_process; RNA splicing GO:0016607; cellular_component; nuclear speck GO:0021987; biological_process; cerebral cortex development GO:0071007; cellular_component; U2-type catalytic step 2 spliceosome GO:0071010; cellular_component; prespliceosome GO:0071011; cellular_component; precatalytic spliceosome GO:0071012; cellular_component; catalytic step 1 spliceosome GO:0071013; cellular_component; catalytic step 2 spliceosome GO:0071014; cellular_component; post-mRNA release spliceosomal complex GO:1990416; biological_process; cellular response to brain-derived neurotrophic factor stimulus GO:1990830; biological_process; cellular response to leukemia inhibitory factor
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0008100.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)