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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0010150

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0010150
Locus	HORVU.MOREX.r2.1HG0010150.1
URL	Gene Ontology GO:0003829 [ Show all 12 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 14 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Low temperature and salt responsive protein family GO:0003829; molecular_function; beta-1, 3-galactosyl-O-glycosyl-glycoprotein beta-1, 6-N-acetylglucosaminyltransferase activity GO:0006486; biological_process; protein glycosylation GO:0008109; molecular_function; N-acetyllactosaminide beta-1, 6-N-acetylglucosaminyltransferase activity GO:0008375; molecular_function; acetylglucosaminyltransferase activity GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016740; molecular_function; transferase activity GO:0016757; molecular_function; transferase activity, transferring glycosyl groups GO:0033644; cellular_component; host cell membrane GO:0044177; cellular_component; host cell Golgi apparatus GO:0044178; cellular_component; host cell Golgi membrane GO:0047225; molecular_function; acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1, 6-N-acetylglucosaminyltransferase activity
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0010150.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)