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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0018740

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0018740
Locus	HORVU.MOREX.r2.1HG0018740.1
URL	Gene Ontology GO:0000146 [ Show all 67 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 69 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: WAT1-related protein GO:0000146; molecular_function; microfilament motor activity GO:0000166; molecular_function; nucleotide binding GO:0001525; biological_process; angiogenesis GO:0001725; cellular_component; stress fiber GO:0001726; cellular_component; ruffle GO:0001965; molecular_function; G-protein alpha-subunit binding GO:0003774; molecular_function; motor activity GO:0003777; molecular_function; microtubule motor activity GO:0003779; molecular_function; actin binding GO:0005391; molecular_function; sodium:potassium-exchanging ATPase activity GO:0005515; molecular_function; protein binding GO:0005516; molecular_function; calmodulin binding GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005739; cellular_component; mitochondrion GO:0005826; cellular_component; actomyosin contractile ring GO:0005829; cellular_component; cytosol GO:0005856; cellular_component; cytoskeleton GO:0005884; cellular_component; actin filament GO:0005886; cellular_component; plasma membrane GO:0005903; cellular_component; brush border GO:0005938; cellular_component; cell cortex GO:0006509; biological_process; membrane protein ectodomain proteolysis GO:0007018; biological_process; microtubule-based movement GO:0007155; biological_process; cell adhesion GO:0008017; molecular_function; microtubule binding GO:0008360; biological_process; regulation of cell shape GO:0010248; biological_process; establishment or maintenance of transmembrane electrochemical gradient GO:0015031; biological_process; protein transport GO:0015629; cellular_component; actin cytoskeleton GO:0016324; cellular_component; apical plasma membrane GO:0016328; cellular_component; lateral plasma membrane GO:0016459; cellular_component; myosin complex GO:0016887; molecular_function; ATPase activity GO:0019901; molecular_function; protein kinase binding GO:0030027; cellular_component; lamellipodium GO:0030048; biological_process; actin filament-based movement GO:0030220; biological_process; platelet formation GO:0030224; biological_process; monocyte differentiation GO:0031252; cellular_component; cell leading edge GO:0031532; biological_process; actin cytoskeleton reorganization GO:0031762; molecular_function; follicle-stimulating hormone receptor binding GO:0032154; cellular_component; cleavage furrow GO:0032506; biological_process; cytokinetic process GO:0032962; biological_process; positive regulation of inositol trisphosphate biosynthetic process GO:0032991; cellular_component; protein-containing complex GO:0035774; biological_process; positive regulation of insulin secretion involved in cellular response to glucose stimulus GO:0036120; biological_process; cellular response to platelet-derived growth factor stimulus GO:0042699; biological_process; follicle-stimulating hormone signaling pathway GO:0042802; molecular_function; identical protein binding GO:0042803; molecular_function; protein homodimerization activity GO:0043495; molecular_function; protein membrane adaptor activity GO:0043534; biological_process; blood vessel endothelial cell migration GO:0045745; biological_process; positive regulation of G protein-coupled receptor signaling pathway GO:0045807; biological_process; positive regulation of endocytosis GO:0050766; biological_process; positive regulation of phagocytosis GO:0051015; molecular_function; actin filament binding GO:0051017; biological_process; actin filament bundle assembly GO:0051482; biological_process; positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway GO:0051894; biological_process; positive regulation of focal adhesion assembly GO:0070374; biological_process; positive regulation of ERK1 and ERK2 cascade GO:0070650; biological_process; actin filament bundle distribution GO:0071260; biological_process; cellular response to mechanical stimulus GO:0097110; molecular_function; scaffold protein binding GO:0098609; biological_process; cell-cell adhesion GO:1904753; biological_process; negative regulation of vascular associated smooth muscle cell migration
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0018740.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)