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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0026700

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0026700
Locus	HORVU.MOREX.r2.1HG0026700.1
URL	Gene Ontology GO:0004222 [ Show all 22 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 24 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Poly(A) RNA polymerase cid11 GO:0004222; molecular_function; metalloendopeptidase activity GO:0005576; cellular_component; extracellular region GO:0006508; biological_process; proteolysis GO:0008233; molecular_function; peptidase activity GO:0008237; molecular_function; metallopeptidase activity GO:0008270; molecular_function; zinc ion binding GO:0008320; molecular_function; protein transmembrane transporter activity GO:0009405; biological_process; pathogenesis GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016787; molecular_function; hydrolase activity GO:0020002; cellular_component; host cell plasma membrane GO:0030430; cellular_component; host cell cytoplasm GO:0033644; cellular_component; host cell membrane GO:0044156; cellular_component; host cell junction GO:0044164; cellular_component; host cell cytosol GO:0044221; cellular_component; host cell synapse GO:0044231; cellular_component; host cell presynaptic membrane GO:0046872; molecular_function; metal ion binding GO:0046929; biological_process; negative regulation of neurotransmitter secretion GO:0071806; biological_process; protein transmembrane transport GO:0090729; molecular_function; toxin activity
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0026700.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)