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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0041790

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.1HG0041790
Locus
HORVU.MOREX.r2.1HG0041790.1
URL
Gene Ontology GO:0000166
[ Show all 12 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 14 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: D-3-phosphoglycerate dehydrogenase
GO:0000166; molecular_function; nucleotide binding
GO:0000287; molecular_function; magnesium ion binding
GO:0005524; molecular_function; ATP binding
GO:0005622; cellular_component; intracellular
GO:0016301; molecular_function; kinase activity
GO:0016310; biological_process; phosphorylation
GO:0016740; molecular_function; transferase activity
GO:0032957; biological_process; inositol trisphosphate metabolic process
GO:0046872; molecular_function; metal ion binding
GO:0047325; molecular_function; inositol tetrakisphosphate 1-kinase activity
GO:0052725; molecular_function; inositol-1, 3, 4-trisphosphate 6-kinase activity
GO:0052726; molecular_function; inositol-1, 3, 4-trisphosphate 5-kinase activity
Type
Genomic
Sequence
HORVU.MOREX.r2.1HG0041790.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)