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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0048410

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0048410
Locus	HORVU.MOREX.r2.1HG0048410.1
URL	Gene Ontology GO:0000165 [ Show all 17 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 19 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: HAT transposon superfamily GO:0000165; biological_process; MAPK cascade GO:0001525; biological_process; angiogenesis GO:0001938; biological_process; positive regulation of endothelial cell proliferation GO:0005125; molecular_function; cytokine activity GO:0005576; cellular_component; extracellular region GO:0005615; cellular_component; extracellular space GO:0010469; biological_process; regulation of signaling receptor activity GO:0030141; cellular_component; secretory granule GO:0031045; cellular_component; dense core granule GO:0035556; biological_process; intracellular signal transduction GO:0042056; molecular_function; chemoattractant activity GO:0048245; biological_process; eosinophil chemotaxis GO:0050918; biological_process; positive chemotaxis GO:0050930; biological_process; induction of positive chemotaxis GO:0098992; cellular_component; neuronal dense core vesicle GO:2000352; biological_process; negative regulation of endothelial cell apoptotic process GO:2001237; biological_process; negative regulation of extrinsic apoptotic signaling pathway
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0048410.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)