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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0049300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0049300
Locus	HORVU.MOREX.r2.1HG0049300.1
URL	Gene Ontology GO:0006631 [ Show all 15 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 17 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: SAGA-associated factor 11 GO:0006631; biological_process; fatty acid metabolic process GO:0006979; biological_process; response to oxidative stress GO:0009266; biological_process; response to temperature stimulus GO:0009507; cellular_component; chloroplast GO:0009534; cellular_component; chloroplast thylakoid GO:0009644; biological_process; response to high light intensity GO:0009651; biological_process; response to salt stress GO:0009915; biological_process; phloem sucrose loading GO:0009941; cellular_component; chloroplast envelope GO:0009976; molecular_function; tocopherol cyclase activity GO:0010189; biological_process; vitamin E biosynthetic process GO:0010287; cellular_component; plastoglobule GO:0015994; biological_process; chlorophyll metabolic process GO:0016122; biological_process; xanthophyll metabolic process GO:0031347; biological_process; regulation of defense response
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0049300.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)