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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0051120

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0051120
Locus	HORVU.MOREX.r2.1HG0051120.1
URL	Gene Ontology GO:0000166 [ Show all 46 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 48 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Phosphatidylglycerol lysyltransferase GO:0000166; molecular_function; nucleotide binding GO:0001754; biological_process; eye photoreceptor cell differentiation GO:0003774; molecular_function; motor activity GO:0003777; molecular_function; microtubule motor activity GO:0005515; molecular_function; protein binding GO:0005523; molecular_function; tropomyosin binding GO:0005524; molecular_function; ATP binding GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0005856; cellular_component; cytoskeleton GO:0005871; cellular_component; kinesin complex GO:0005874; cellular_component; microtubule GO:0007018; biological_process; microtubule-based movement GO:0007097; biological_process; nuclear migration GO:0007303; biological_process; cytoplasmic transport, nurse cell to oocyte GO:0007310; biological_process; oocyte dorsal/ventral axis specification GO:0007315; biological_process; pole plasm assembly GO:0007317; biological_process; regulation of pole plasm oskar mRNA localization GO:0007409; biological_process; axonogenesis GO:0007411; biological_process; axon guidance GO:0008017; molecular_function; microtubule binding GO:0008088; biological_process; axo-dendritic transport GO:0008103; biological_process; oocyte microtubule cytoskeleton polarization GO:0008345; biological_process; larval locomotory behavior GO:0008574; molecular_function; ATP-dependent microtubule motor activity, plus-end-directed GO:0010970; biological_process; transport along microtubule GO:0030478; cellular_component; actin cap GO:0032839; cellular_component; dendrite cytoplasm GO:0035371; cellular_component; microtubule plus-end GO:0035617; biological_process; stress granule disassembly GO:0045202; cellular_component; synapse GO:0045451; biological_process; pole plasm oskar mRNA localization GO:0046785; biological_process; microtubule polymerization GO:0046843; biological_process; dorsal appendage formation GO:0048311; biological_process; mitochondrion distribution GO:0048312; biological_process; intracellular distribution of mitochondria GO:0048489; biological_process; synaptic vesicle transport GO:0048741; biological_process; skeletal muscle fiber development GO:0048813; biological_process; dendrite morphogenesis GO:0051012; biological_process; microtubule sliding GO:0051299; biological_process; centrosome separation GO:0061572; biological_process; actin filament bundle organization GO:0070868; biological_process; heterochromatin organization involved in chromatin silencing GO:0098937; biological_process; anterograde dendritic transport GO:0098957; biological_process; anterograde axonal transport of mitochondrion GO:1904115; cellular_component; axon cytoplasm
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0051120.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)