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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0055290

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0055290
Locus	HORVU.MOREX.r2.1HG0055290.1
URL	Gene Ontology GO:0005215 [ Show all 29 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 31 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Serine/threonine protein phosphatase 7 long form isogeny GO:0005215; molecular_function; transporter activity GO:0005515; molecular_function; protein binding GO:0005886; cellular_component; plasma membrane GO:0006811; biological_process; ion transport GO:0006813; biological_process; potassium ion transport GO:0006814; biological_process; sodium ion transport GO:0006821; biological_process; chloride transport GO:0006972; biological_process; hyperosmotic response GO:0008511; molecular_function; sodium:potassium:chloride symporter activity GO:0008519; molecular_function; ammonium transmembrane transporter activity GO:0015293; molecular_function; symporter activity GO:0015377; molecular_function; cation:chloride symporter activity GO:0015696; biological_process; ammonium transport GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016323; cellular_component; basolateral plasma membrane GO:0016324; cellular_component; apical plasma membrane GO:0019901; molecular_function; protein kinase binding GO:0030321; biological_process; transepithelial chloride transport GO:0035264; biological_process; multicellular organism growth GO:0045795; biological_process; positive regulation of cell volume GO:0050910; biological_process; detection of mechanical stimulus involved in sensory perception of sound GO:0055085; biological_process; transmembrane transport GO:0060444; biological_process; branching involved in mammary gland duct morphogenesis GO:0060763; biological_process; mammary duct terminal end bud growth GO:0070634; biological_process; transepithelial ammonium transport GO:0071805; biological_process; potassium ion transmembrane transport GO:0072488; biological_process; ammonium transmembrane transport GO:1902476; biological_process; chloride transmembrane transport
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0055290.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)