GrainGenes Probe Report: HORVU.MOREX.r2.1HG0064500
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
HORVU.MOREX.r2.1HG0064500
Locus
HORVU.MOREX.r2.1HG0064500.1
URL
Gene Ontology GO:0000462
[ Show all 13 ]
Reference
Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 15 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: ABC transporter B family protein GO:0000462; biological_process; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0005634; cellular_component; nucleus GO:0005730; cellular_component; nucleolus GO:0006351; biological_process; transcription, DNA-templated GO:0006364; biological_process; rRNA processing GO:0030490; biological_process; maturation of SSU-rRNA GO:0030515; molecular_function; snoRNA binding GO:0030686; cellular_component; 90S preribosome GO:0030688; cellular_component; preribosome, small subunit precursor GO:0032040; cellular_component; small-subunit processome GO:0034455; cellular_component; t-UTP complex GO:0042254; biological_process; ribosome biogenesis GO:0045943; biological_process; positive regulation of transcription by RNA polymerase I
Type
Genomic
Sequence
HORVU.MOREX.r2.1HG0064500.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)
GrainGenes Probe Report: HORVU.MOREX.r2.1HG0064500
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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