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GrainGenes Probe Report: HORVU.MOREX.r2.1HG0072780

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.1HG0072780
Locus	HORVU.MOREX.r2.1HG0072780.1
URL	Gene Ontology GO:0000166 [ Show all 30 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 32 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: 60S ribosomal protein L18A GO:0000166; molecular_function; nucleotide binding GO:0001653; molecular_function; peptide receptor activity GO:0004672; molecular_function; protein kinase activity GO:0004674; molecular_function; protein serine/threonine kinase activity GO:0004714; molecular_function; transmembrane receptor protein tyrosine kinase activity GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005886; cellular_component; plasma membrane GO:0006468; biological_process; protein phosphorylation GO:0007165; biological_process; signal transduction GO:0007275; biological_process; multicellular organism development GO:0010051; biological_process; xylem and phloem pattern formation GO:0010311; biological_process; lateral root formation GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016301; molecular_function; kinase activity GO:0016310; biological_process; phosphorylation GO:0016740; molecular_function; transferase activity GO:0017046; molecular_function; peptide hormone binding GO:0018108; biological_process; peptidyl-tyrosine phosphorylation GO:0031540; biological_process; regulation of anthocyanin biosynthetic process GO:0042277; molecular_function; peptide binding GO:0048831; biological_process; regulation of shoot system development GO:0090548; biological_process; response to nitrate starvation GO:1901141; biological_process; regulation of lignin biosynthetic process GO:1901333; biological_process; positive regulation of lateral root development GO:1902025; biological_process; nitrate import GO:2000023; biological_process; regulation of lateral root development GO:2000280; biological_process; regulation of root development GO:2000652; biological_process; regulation of secondary cell wall biogenesis
Type	Genomic
Sequence	HORVU.MOREX.r2.1HG0072780.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)