Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.2HG0079800

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0079800
Locus	HORVU.MOREX.r2.2HG0079800.1
URL	Gene Ontology GO:0003674 [ Show all 20 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 22 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Agenet domain, putative GO:0003674; molecular_function; molecular_function GO:0003779; molecular_function; actin binding GO:0005575; cellular_component; cellular_component GO:0005654; cellular_component; nucleoplasm GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0005856; cellular_component; cytoskeleton GO:0005886; cellular_component; plasma membrane GO:0007009; biological_process; plasma membrane organization GO:0008150; biological_process; biological_process GO:0008286; biological_process; insulin receptor signaling pathway GO:0009617; biological_process; response to bacterium GO:0015629; cellular_component; actin cytoskeleton GO:0030833; biological_process; regulation of actin filament polymerization GO:0030838; biological_process; positive regulation of actin filament polymerization GO:0046626; biological_process; regulation of insulin receptor signaling pathway GO:0051017; biological_process; actin filament bundle assembly GO:0051764; biological_process; actin crosslink formation GO:0070064; molecular_function; proline-rich region binding GO:2000251; biological_process; positive regulation of actin cytoskeleton reorganization
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0079800.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)