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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0098070

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0098070
Locus	HORVU.MOREX.r2.2HG0098070.1
URL	Gene Ontology GO:0000166 [ Show all 32 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 34 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Gibberellin receptor GID1a GO:0000166; molecular_function; nucleotide binding GO:0000287; molecular_function; magnesium ion binding GO:0000822; molecular_function; inositol hexakisphosphate binding GO:0003824; molecular_function; catalytic activity GO:0004197; molecular_function; cysteine-type endopeptidase activity GO:0005509; molecular_function; calcium ion binding GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005576; cellular_component; extracellular region GO:0006508; biological_process; proteolysis GO:0008152; biological_process; metabolic process GO:0008233; molecular_function; peptidase activity GO:0008234; molecular_function; cysteine-type peptidase activity GO:0008289; molecular_function; lipid binding GO:0009405; biological_process; pathogenesis GO:0016020; cellular_component; membrane GO:0016540; biological_process; protein autoprocessing GO:0016787; molecular_function; hydrolase activity GO:0016874; molecular_function; ligase activity GO:0016881; molecular_function; acid-amino acid ligase activity GO:0018153; biological_process; isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine GO:0018262; biological_process; isopeptide cross-linking GO:0019836; biological_process; hemolysis by symbiont of host erythrocytes GO:0020002; cellular_component; host cell plasma membrane GO:0030042; biological_process; actin filament depolymerization GO:0030430; cellular_component; host cell cytoplasm GO:0031640; biological_process; killing of cells of other organism GO:0033644; cellular_component; host cell membrane GO:0044164; cellular_component; host cell cytosol GO:0046872; molecular_function; metal ion binding GO:0090527; biological_process; actin filament reorganization GO:0090729; molecular_function; toxin activity
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0098070.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)