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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0098160

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.2HG0098160
Locus
HORVU.MOREX.r2.2HG0098160.1
URL
Gene Ontology GO:0008697
Gene Ontology GO:0016853
Gene Ontology GO:0016861
Gene Ontology GO:0045490
Gene Ontology GO:0046872
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 7 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta).
Functional annotation published with the genome: Zinc transporter
GO:0008697; molecular_function; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity
GO:0016853; molecular_function; isomerase activity
GO:0016861; molecular_function; intramolecular oxidoreductase activity, interconverting aldoses and ketoses
GO:0045490; biological_process; pectin catabolic process
GO:0046872; molecular_function; metal ion binding
Type
Genomic
Sequence
HORVU.MOREX.r2.2HG0098160.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)