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GrainGenes Probe Report: HORVU.MOREX.r2.2HG0123030

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.2HG0123030
Locus	HORVU.MOREX.r2.2HG0123030.1
URL	Gene Ontology GO:0001523 [ Show all 62 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 64 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Polyribonucleotide nucleotidyltransferase, putative GO:0001523; biological_process; retinoid metabolic process GO:0001843; biological_process; neural tube closure GO:0003139; biological_process; secondary heart field specification GO:0003148; biological_process; outflow tract septum morphogenesis GO:0003223; biological_process; ventricular compact myocardium morphogenesis GO:0003281; biological_process; ventricular septum development GO:0005041; molecular_function; low-density lipoprotein particle receptor activity GO:0005509; molecular_function; calcium ion binding GO:0005515; molecular_function; protein binding GO:0005764; cellular_component; lysosome GO:0005765; cellular_component; lysosomal membrane GO:0005768; cellular_component; endosome GO:0005783; cellular_component; endoplasmic reticulum GO:0005794; cellular_component; Golgi apparatus GO:0005886; cellular_component; plasma membrane GO:0005903; cellular_component; brush border GO:0005905; cellular_component; clathrin-coated pit GO:0006629; biological_process; lipid metabolic process GO:0006766; biological_process; vitamin metabolic process GO:0006897; biological_process; endocytosis GO:0006898; biological_process; receptor-mediated endocytosis GO:0007399; biological_process; nervous system development GO:0007507; biological_process; heart development GO:0007605; biological_process; sensory perception of sound GO:0008144; molecular_function; drug binding GO:0008283; biological_process; cell population proliferation GO:0008584; biological_process; male gonad development GO:0009897; cellular_component; external side of plasma membrane GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016324; cellular_component; apical plasma membrane GO:0017124; molecular_function; SH3 domain binding GO:0030001; biological_process; metal ion transport GO:0030139; cellular_component; endocytic vesicle GO:0030424; cellular_component; axon GO:0030425; cellular_component; dendrite GO:0030514; biological_process; negative regulation of BMP signaling pathway GO:0030665; cellular_component; clathrin-coated vesicle membrane GO:0030900; biological_process; forebrain development GO:0031526; cellular_component; brush border membrane GO:0031904; cellular_component; endosome lumen GO:0035258; molecular_function; steroid hormone receptor binding GO:0035904; biological_process; aorta development GO:0042359; biological_process; vitamin D metabolic process GO:0042953; biological_process; lipoprotein transport GO:0042954; molecular_function; obsolete lipoprotein transporter activity GO:0042995; cellular_component; cell projection GO:0043235; cellular_component; receptor complex GO:0045177; cellular_component; apical part of cell GO:0046872; molecular_function; metal ion binding GO:0050769; biological_process; positive regulation of neurogenesis GO:0051087; molecular_function; chaperone binding GO:0060068; biological_process; vagina development GO:0060976; biological_process; coronary vasculature development GO:0060982; biological_process; coronary artery morphogenesis GO:0061024; biological_process; membrane organization GO:0061156; biological_process; pulmonary artery morphogenesis GO:0070062; cellular_component; extracellular exosome GO:0070447; biological_process; positive regulation of oligodendrocyte progenitor proliferation GO:0140058; biological_process; neuron projection arborization GO:1904447; biological_process; folate import across plasma membrane GO:1905167; biological_process; positive regulation of lysosomal protein catabolic process
Type	Genomic
Sequence	HORVU.MOREX.r2.2HG0123030.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)